<div dir="ltr"><div dir="ltr">Hi Tim, <div><br></div><div>Copying the rest of IM's to try and keep folks on the same page. <br></div></div><blockquote style="margin:0 0 0 40px;border:none;padding:0px"><div><div><div>Tim asks: </div></div></div><div><div><span style="color:rgb(31,73,125);font-family:Calibri,sans-serif;font-size:14.6667px">If authors tag papers as NSF-LTER-XXX, then when I use Zotero Connector to scrape the metadata it will include the tag NSF-LTER-XXX. Then I would add the tag LTER-XXX so that it works in your bibliography. So I'll have both tags NSF-LTER-XXX and LTER-XXX for that item in Zotero. I just wanted to make sure I'm interpreting the protocol correctly. I'm about to update my website with instructions for PIs when they publish something and I want to get it right.</span></div></div></blockquote><div dir="ltr"><div><br></div><div>As we've moved through this process, I've come to think that we probably can't prescribe NSF-LTER-XXX for use in papers. I thought funding source was actually a metadata entry for papers, but it seems that some databases (Web of Science, particularly) scrape it from the text acknowledgements section. It's not realistic to think that we will be able to get enough people to use that exact formulation in a text section for it to be useful.</div><div><br></div><div>So please use LTER-XXX in the tag or keywords for your site database (for those we are operating within the context of our own organization, so no need to add the NSF). In paper acknowledgements, the safest recommendation is to use both the name of the site(s) (including LTER, if it is an LTER paper) <u>and</u> the grant number. </div><div><br></div><div>Thanks, Marty</div><div> </div></div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Thu, Mar 7, 2019 at 9:11 AM Whiteaker, Timothy L <<a href="mailto:whiteaker@utexas.edu">whiteaker@utexas.edu</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex">
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<p class="MsoNormal"><span style="font-size:11pt;font-family:Calibri,sans-serif;color:rgb(31,73,125)">Hi Marty,<u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:11pt;font-family:Calibri,sans-serif;color:rgb(31,73,125)"><u></u> <u></u></span></p>
<p class="MsoNormal"><span style="font-size:11pt;font-family:Calibri,sans-serif;color:rgb(31,73,125)">If authors tag papers as NSF-LTER-XXX, then when I use Zotero Connector to scrape the metadata it will include the tag NSF-LTER-XXX. Then I would add the tag
LTER-XXX so that it works in your bibliography. So I'll have both tags NSF-LTER-XXX and LTER-XXX for that item in Zotero. I just wanted to make sure I'm interpreting the protocol correctly. I'm about to update my website with instructions for PIs when they
publish something and I want to get it right.<u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:11pt;font-family:Calibri,sans-serif;color:rgb(31,73,125)"><u></u> <u></u></span></p>
<p class="MsoNormal"><span style="font-size:11pt;font-family:Calibri,sans-serif;color:rgb(31,73,125)">Tim Whiteaker<u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:11pt;font-family:Calibri,sans-serif;color:rgb(31,73,125)">Research Scientist<u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:11pt;font-family:Calibri,sans-serif;color:rgb(31,73,125)">The University of Texas at Austin<u></u><u></u></span></p>
<p class="MsoNormal"><span style="font-size:11pt;font-family:Calibri,sans-serif;color:rgb(31,73,125)"><u></u> <u></u></span></p>
<p class="MsoNormal"><b><span style="font-size:11pt;font-family:Calibri,sans-serif">From:</span></b><span style="font-size:11pt;font-family:Calibri,sans-serif"> im <<a href="mailto:im-bounces@lists.lternet.edu" target="_blank">im-bounces@lists.lternet.edu</a>>
<b>On Behalf Of </b>Marty Downs<br>
<b>Sent:</b> Wednesday, February 13, 2019 10:04 AM<br>
<b>To:</b> Hap Garritt <<a href="mailto:hgarritt@mbl.edu" target="_blank">hgarritt@mbl.edu</a>><br>
<b>Cc:</b> IM committee <<a href="mailto:im@lternet.edu" target="_blank">im@lternet.edu</a>><br>
<b>Subject:</b> Re: [LTER-im] bibliography update<u></u><u></u></span></p>
<p class="MsoNormal"><u></u> <u></u></p>
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<p class="MsoNormal">Sorry. NSF-LTER-XXX in papers -- so we can find them. LTER-XXX in the bibliography, because it's ours. If you've already set it up the other way, that's fine, I can make the switch when we import them.<u></u><u></u></p>
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<p class="MsoNormal"><u></u> <u></u></p>
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<p class="MsoNormal">Cheers, Marty<u></u><u></u></p>
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<p class="MsoNormal">On Wed, Feb 13, 2019 at 6:52 AM Hap Garritt <<a href="mailto:hgarritt@mbl.edu" target="_blank">hgarritt@mbl.edu</a>> wrote:<u></u><u></u></p>
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<p style="margin:0in 0in 0.0001pt"><span style="font-family:Calibri,sans-serif;color:black">Hi Marty,<u></u><u></u></span></p>
<p style="margin:0in 0in 0.0001pt"><span style="font-family:Calibri,sans-serif;color:black"><u></u> <u></u></span></p>
<p style="margin:0in 0in 0.0001pt"><span style="font-family:Calibri,sans-serif;color:black">A little confused, I thought you wanted NSF-LTER-XXX for identifying LTER site since you mentioned that ILTER uses just LTER.<u></u><u></u></span></p>
<p style="margin:0in 0in 0.0001pt"><span style="font-family:Calibri,sans-serif;color:black"><u></u> <u></u></span></p>
<p style="margin:0in 0in 0.0001pt"><span style="font-family:Calibri,sans-serif;color:black">Thanks<u></u><u></u></span></p>
<p style="margin:0in 0in 0.0001pt"><span style="font-family:Calibri,sans-serif;color:black">Hap<u></u><u></u></span></p>
<p style="margin:0in 0in 0.0001pt"><span style="font-family:Calibri,sans-serif;color:black"><u></u> <u></u></span></p>
<p style="margin:0in 0in 0.0001pt"><span style="font-family:Calibri,sans-serif;color:black"><u></u> <u></u></span></p>
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<p class="MsoNormal"><b><span style="font-size:11pt;font-family:Calibri,sans-serif;color:black">From:</span></b><span style="font-size:11pt;font-family:Calibri,sans-serif;color:black"> im <<a href="mailto:im-bounces@lists.lternet.edu" target="_blank">im-bounces@lists.lternet.edu</a>>
on behalf of Marty Downs <<a href="mailto:downs@nceas.ucsb.edu" target="_blank">downs@nceas.ucsb.edu</a>><br>
<b>Sent:</b> Tuesday, February 12, 2019 5:47 PM<br>
<b>To:</b> <a href="mailto:im@lternet.edu" target="_blank">im@lternet.edu</a><br>
<b>Cc:</b> <a href="mailto:lter-admins@lternet.edu" target="_blank">lter-admins@lternet.edu</a>;
<a href="mailto:lpi@lternet.edu" target="_blank">lpi@lternet.edu</a><br>
<b>Subject:</b> [LTER-im] bibliography update</span><span style="font-family:Calibri,sans-serif;color:black">
<u></u><u></u></span></p>
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<p class="MsoNormal"><span style="font-family:Calibri,sans-serif;color:black">Hi all, <u></u><u></u></span></p>
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<p class="MsoNormal"><i><span style="font-family:Calibri,sans-serif;color:black">This is primarily addressed to the LTER information managers, but I am copying PIs and admins to keep them in the loop.</span></i><span style="font-family:Calibri,sans-serif;color:black"><u></u><u></u></span></p>
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<p class="MsoNormal"><span style="font-family:Calibri,sans-serif;color:black">Thanks for the useful discussion yesterday. It's spurred a few updates to the process for the LTER Network bibliographies. <u></u><u></u></span></p>
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<p class="MsoNormal"><span style="font-family:Calibri,sans-serif;color:black">1)
<b>Joining the LTER Network Zotero group. </b>Those who use Zotero for reference management are welcome to join the LTER Network Zotero group. While you are logged in to the
<u>account that you want to connect</u> with the Network, search for the LTER Network group -- or go directly to this page: <a href="https://www.zotero.org/groups/2055673/lter_network" id="gmail-m_668218570655453236gmail-m_-4438699819822948852LPlnk48689" target="_blank">https://www.zotero.org/groups/2055673/lter_network</a> and
request to join at the lower right. <u></u><u></u></span></p>
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<p class="MsoNormal"><span style="font-family:Calibri,sans-serif;color:black">Zotero group members with write privileges can simply drag references from your collection of "network" items to the corresponding LTER Network collection. <u></u><u></u></span></p>
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<p class="MsoNormal"><span style="font-family:Calibri,sans-serif;color:black">2)
<b>Identifying LTER site. </b><u>Do not add the field ltersite.</u> I had thought I would adapt a translator to handle it, but that now seems unwise. Instead, please add a keyword (LTER-ABC) to identify your site. Be sure to export keywords to your BibTeX file.
(also DOIs and URL's if you have them). You are welcome to continue including accession numbers if you have maintained them. If included, they will be used as the unique identifier, but they are not required. If they are not included, Zotero will create a
unique identifier based on the author-title-year and entry type combination.<u></u><u></u></span></p>
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<p class="MsoNormal"><span style="font-family:Calibri,sans-serif;color:black"><u></u> <u></u></span></p>
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<p class="MsoNormal"><span style="font-family:Calibri,sans-serif;color:black">3)
<b>Theses.</b> Zotero exports only phdthesis and mastersthesis and those are the only two entry types that are recognized as standard BibTex (and the only ones that NSF accepts in reports). Much as we would like to track Bachelors theses, I think it will screw
up your NSF exports to do so. It's also clear that many sites have not tracked that information consistently and recreating it is an unreasonable amount of work. <u></u><u></u></span></p>
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<p class="MsoNormal"><span style="font-family:Calibri,sans-serif;color:black"><u></u> <u></u></span></p>
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<p class="MsoNormal"><span style="font-family:Calibri,sans-serif;color:black">For the purposes of the 40 year review,
<b>do not include</b> undergraduate theses in your export. If you are tracking undergraduate theses currently, please let me know how you are handling them and we'll try to come to some consensus. <u></u><u></u></span></p>
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<p class="MsoNormal"><span style="font-family:Calibri,sans-serif;color:black"><u></u> <u></u></span></p>
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<p class="MsoNormal"><span style="font-family:Calibri,sans-serif;color:black">4)
<b>Serial updates. </b><u></u><u></u></span></p>
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<p class="MsoNormal"><span style="font-family:Calibri,sans-serif;color:black">We expect to request annual updates. Zotero has a good system for merging duplicates that relies on a combination of author-title-year and entry-type, but it still requires some
manual attention. <u></u><u></u></span></p>
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<p class="MsoNormal"><span style="font-family:Calibri,sans-serif;color:black"><u></u> <u></u></span></p>
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<p class="MsoNormal"><span style="font-family:Calibri,sans-serif;color:black">In Zotero, the date-modified field will allow you to export only the references that have changed after a given date. I believe that EndNote and most other databases have a similar
field. After this initial update, please send only the references that have changed or been added since your last update. <u></u><u></u></span></p>
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<p class="MsoNormal"><span style="font-family:Calibri,sans-serif;color:black"><u></u> <u></u></span></p>
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<p class="MsoNormal"><span style="font-family:Calibri,sans-serif;color:black">Thanks for your patience as I work through the kinks, <u></u><u></u></span></p>
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<p class="MsoNormal"><span style="font-family:Calibri,sans-serif;color:black">Marty<u></u><u></u></span></p>
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<p class="MsoNormal"><span style="font-family:Calibri,sans-serif;color:black"><u></u> <u></u></span></p>
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<p class="MsoNormal"><span style="font-family:Calibri,sans-serif;color:black">--
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<p class="MsoNormal"><span style="font-family:Calibri,sans-serif;color:black">Deputy Director, LTER </span><span style="font-size:9.5pt;font-family:Calibri,sans-serif;color:black">Network Communications Office</span><span style="font-family:Calibri,sans-serif;color:black"><u></u><u></u></span></p>
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<a href="https://lternet.edu/" id="gmail-m_668218570655453236gmail-m_-4438699819822948852LPlnk907356" target="_blank"><span style="color:rgb(17,85,204)">https://lternet.edu</span></a><br>
<a href="http://us12.campaign-archive.com/?u=d7494403ed9d8c97a5479f0d4&id=9c0b9b36a4" id="gmail-m_668218570655453236gmail-m_-4438699819822948852LPlnk76190" target="_blank"><span style="color:rgb(17,85,204)">LTER Science Update</span></a><u></u><u></u></span></p>
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<p class="MsoNormal"><span style="font-family:Calibri,sans-serif;color:black">t: @USLTER<u></u><u></u></span></p>
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<p class="MsoNormal"><span style="font-size:9.5pt;font-family:Calibri,sans-serif;color:black">National Center for Ecological Analysis and Synthesis (NCEAS)</span><span style="font-family:Calibri,sans-serif;color:black"><u></u><u></u></span></p>
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<p class="MsoNormal"><span style="font-size:9.5pt;font-family:Calibri,sans-serif;color:black">University of California, Santa Barbara<br>
</span><span style="font-family:Calibri,sans-serif;color:black">Office: 805-893-7549<u></u><u></u></span></p>
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<p class="MsoNormal"><span style="font-family:Calibri,sans-serif;color:black">Cell: 617-833-7930<u></u><u></u></span></p>
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<p class="MsoNormal"><span style="font-family:Calibri,sans-serif;color:black"><a href="mailto:downs@nceas.ucsb.edu" id="gmail-m_668218570655453236gmail-m_-4438699819822948852LPlnk241445" target="_blank"><span style="color:rgb(17,85,204)">downs@nceas.ucsb.edu</span></a><u></u><u></u></span></p>
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<p class="MsoNormal">Deputy Director, LTER <span style="font-size:9.5pt">Network Communications Office</span><u></u><u></u></p>
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<a href="https://lternet.edu/" target="_blank"><span style="color:rgb(17,85,204)">https://lternet.edu</span></a><br>
<a href="http://us12.campaign-archive.com/?u=d7494403ed9d8c97a5479f0d4&id=9c0b9b36a4" target="_blank"><span style="color:rgb(17,85,204)">LTER Science Update</span></a><u></u><u></u></p>
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<p class="MsoNormal">t: @USLTER<u></u><u></u></p>
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<p class="MsoNormal"><span style="font-size:9.5pt">University of California, Santa Barbara<br>
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</blockquote></div><br clear="all"><div><br></div>-- <br><div dir="ltr" class="gmail_signature"><div dir="ltr"><div><div dir="ltr"><div><div dir="ltr"><div><div dir="ltr"><div dir="ltr"><div dir="ltr"><div dir="ltr"><div dir="ltr"><div dir="ltr"><div dir="ltr"><div dir="ltr"><div dir="ltr"><div dir="ltr"><div dir="ltr"><div dir="ltr"><span style="font-size:small">Marty Downs (she/her/hers)</span><div style="font-size:small">Deputy Director, LTER <span style="font-size:12.8px">Network Communications Office</span></div><div style="font-size:small"><br><img src="https://drive.google.com/a/nceas.ucsb.edu/uc?id=1qFadGx0hEm04xFRLFpVFxBUSEQk5T4c4&export=download" width="200" height="37"><br><br><a href="https://lternet.edu/" style="color:rgb(17,85,204)" target="_blank">https://lternet.edu</a><br><a href="http://us12.campaign-archive.com/?u=d7494403ed9d8c97a5479f0d4&id=9c0b9b36a4" style="color:rgb(17,85,204)" target="_blank">LTER Science Update</a><br></div><div style="font-size:small">t: @USLTER</div><div style="font-size:small">f: USLTER</div><div style="font-size:small"><br></div><div style="font-size:small"><span style="font-size:12.8px">National Center for Ecological Analysis and Synthesis (NCEAS)</span><br></div><div style="font-size:small"><span style="font-size:12.8px">University of California, Santa Barbara</span><br style="font-size:12.8px">Office: 805-893-7549</div><div style="font-size:small">Cell: 617-833-7930</div><div style="font-size:small"><a href="mailto:downs@nceas.ucsb.edu" style="color:rgb(17,85,204)" target="_blank">downs@nceas.ucsb.edu</a></div><div><br><br></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div></div>